Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC4.97□□□□□ -1.61
RSPO3Q9BXY4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO3Q9BXY4 AC015689.2-201ENST00000528172 1738 ntBASIC4.97□□□□□ -1.61
RSPO3Q9BXY4 AC004817.4-201ENST00000602396 3625 ntBASIC4.97□□□□□ -1.61
RSPO3Q9BXY4 MTCO1P7-201ENST00000419523 1542 ntBASIC4.97□□□□□ -1.61
RSPO3Q9BXY4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RSPO3Q9BXY4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
RSPO3Q9BXY4 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RNA5SP46-201ENST00000362370 120 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RNA5SP510-201ENST00000364697 99 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 COX5BP7-201ENST00000414780 274 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RPS3P2-201ENST00000421346 701 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RPL19P16-201ENST00000433839 588 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AL450996.1-201ENST00000445574 1202 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 OR52E3P-201ENST00000452083 936 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC007998.1-201ENST00000474156 672 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RN7SL177P-201ENST00000476596 299 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC017007.3-201ENST00000479865 435 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC093827.1-201ENST00000480094 861 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RN7SL273P-201ENST00000481561 299 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 GOLGA5P1-201ENST00000507317 980 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC074087.1-201ENST00000512059 724 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 EIF3KP3-201ENST00000514461 639 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 RNA5SP230-201ENST00000517039 122 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC022826.1-201ENST00000519383 805 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AP001496.3-201ENST00000580230 913 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 NPM1P45-201ENST00000583151 559 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC008115.3-201ENST00000614874 549 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 MIR6839-201ENST00000620425 113 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC132068.1-201ENST00000623805 459 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 FRG1EP-201ENST00000634469 770 ntBASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RSPO3Q9BXY4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 MIR551A-201ENST00000385042 96 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 MIR143-201ENST00000385300 106 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 PRUNEP1-201ENST00000425846 705 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 MTND6P12-201ENST00000428247 522 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC124944.2-201ENST00000429866 1242 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AL161722.1-201ENST00000446972 1032 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 NPM1P19-201ENST00000450070 712 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 RANP1-206ENST00000455094 651 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 CBX1P5-201ENST00000475330 559 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC074386.1-201ENST00000476560 767 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 DEFB109A-201ENST00000482450 265 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 RN7SL814P-201ENST00000487715 300 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 RPS12P31-201ENST00000491419 398 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 CYCSP22-201ENST00000517555 339 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 NRBF2P4-201ENST00000520874 850 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 MAPK10-338ENST00000641647 3362 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 RARSP1-201ENST00000542842 1418 ntBASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RSPO3Q9BXY4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms