Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SCN1BQ07699 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.15□□□□□ -1.58
SCN1BQ07699 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SCN1BQ07699 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCN1BQ07699 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCN1BQ07699 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SCN1BQ07699 MIR320B1-201ENST00000390209 79 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SCN1BQ07699 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 RNGTTP1-201ENST00000420965 728 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 RPSAP65-201ENST00000429660 595 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 RPL12P49-201ENST00000441100 121 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 BTBD7P2-201ENST00000441962 620 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AL356121.1-201ENST00000442911 156 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AC023512.1-201ENST00000444513 499 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC099670.1-201ENST00000455141 783 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 RPS7P10-201ENST00000464254 603 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC095052.1-201ENST00000509955 863 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 MRPS5P3-201ENST00000515577 166 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SCN1BQ07699 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SCN1BQ07699 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AC242628.1-201ENST00000606810 391 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AL591167.1-201ENST00000607321 456 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 RFPL4AP6-201ENST00000616792 846 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AP001005.3-201ENST00000622049 129 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC073488.6-201ENST00000632293 754 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCN1BQ07699 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SCN1BQ07699 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 AC009501.3-201ENST00000605001 1352 ntBASIC5.15□□□□□ -1.59
SCN1BQ07699 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.15□□□□□ -1.59
SCN1BQ07699 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.15□□□□□ -1.59
SCN1BQ07699 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC112198.2-201ENST00000426589 6996 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC083843.2-201ENST00000568248 6253 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC092681.1-201ENST00000297369 291 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 RNU6-225P-201ENST00000384613 103 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 ATP5HP3-201ENST00000396994 486 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 Z86062.1-201ENST00000406773 777 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.14□□□□□ -1.59
SCN1BQ07699 OR10T1P-201ENST00000424327 947 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 ZFAND6P1-201ENST00000434138 605 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC096632.2-201ENST00000438139 1239 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 OR3D1P-201ENST00000438288 955 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 FHP1-201ENST00000442741 703 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 NPM1P19-201ENST00000450070 712 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC004890.1-201ENST00000461005 181 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AL603882.1-201ENST00000463059 681 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC073610.1-201ENST00000489971 396 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 ENPP7P11-201ENST00000505915 627 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC138866.2-201ENST00000508650 584 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 GUSBP9-201ENST00000510138 584 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SCN1BQ07699 OR8A2P-201ENST00000528631 952 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 SNRPGP1-201ENST00000553864 222 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.14□□□□□ -1.59
SCN1BQ07699 AC119403.2-201ENST00000590960 598 ntBASIC5.14□□□□□ -1.59
SCN1BQ07699 AC012557.1-201ENST00000607115 611 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms