Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-1P43699 RPL35AP31-201ENST00000418340 337 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AL121882.1-201ENST00000422893 417 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AL022324.2-201ENST00000434827 780 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 RPEP4-201ENST00000437636 602 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AL359265.1-201ENST00000440296 795 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-1P43699 RPL6P30-201ENST00000443382 862 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 ZNF619P1-201ENST00000446539 752 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 PPIAP32-201ENST00000449940 472 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 CBX1P2-201ENST00000453841 458 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 MTATP6P9-201ENST00000515039 680 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC113191.1-201ENST00000517759 403 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC124891.1-201ENST00000536322 519 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-1P43699 MIR4732-201ENST00000581873 76 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC022001.1-201ENST00000605193 268 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 BNIP3P19-201ENST00000605397 577 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC245389.2-201ENST00000616023 576 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 MIR1264-201ENST00000616374 69 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AC242843.1-201ENST00000618702 573 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AC090772.4-201ENST00000623599 362 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
NKX2-1P43699 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 Z95331.1-201ENST00000623075 23112 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC079298.1-201ENST00000625026 1619 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 MFSD8-239ENST00000641590 2479 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 MFSD8-219ENST00000641228 2559 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL606537.1-201ENST00000607258 2011 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 MTCO1P15-201ENST00000529569 1526 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC092681.1-201ENST00000297369 291 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
NKX2-1P43699 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 TAF9BP2-201ENST00000400856 499 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL133482.1-201ENST00000415988 498 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AL360013.1-201ENST00000419031 858 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 MARK2P12-201ENST00000420129 585 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 MGAT2P2-201ENST00000427194 797 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC094019.1-201ENST00000434678 472 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 ELOCP3-201ENST00000439303 348 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.74□□□□□ -1.65
NKX2-1P43699 RPS18P1-201ENST00000447840 458 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 SEPT7P3-201ENST00000455017 621 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 MTND2P6-201ENST00000455337 1030 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC4.74□□□□□ -1.65
NKX2-1P43699 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.74□□□□□ -1.65
NKX2-1P43699 AC073610.1-201ENST00000489971 396 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC015524.1-201ENST00000491585 472 ntBASIC4.74□□□□□ -1.65
NKX2-1P43699 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms