Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC3P40938 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RFC3P40938 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RFC3P40938 RNA5SP319-201ENST00000362768 119 ntBASIC5.13□□□□□ -1.59
RFC3P40938 RNA5SP234-201ENST00000363916 119 ntBASIC5.13□□□□□ -1.59
RFC3P40938 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RFC3P40938 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 AL391422.1-201ENST00000402155 436 ntBASIC5.13□□□□□ -1.59
RFC3P40938 RNU6-233P-201ENST00000410845 141 ntBASIC5.13□□□□□ -1.59
RFC3P40938 BMS1P13-201ENST00000417301 885 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC3P40938 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC3P40938 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC3P40938 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 AL450023.1-201ENST00000450868 751 ntBASIC5.13□□□□□ -1.59
RFC3P40938 RN7SL51P-201ENST00000468230 285 ntBASIC5.13□□□□□ -1.59
RFC3P40938 RPS4XP1-201ENST00000482189 787 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AC105420.1-201ENST00000504389 582 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AC074255.1-201ENST00000511259 501 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC3P40938 OR4A43P-201ENST00000532938 908 ntBASIC5.13□□□□□ -1.59
RFC3P40938 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC3P40938 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 MIR4660-201ENST00000583549 74 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.13□□□□□ -1.59
RFC3P40938 FKBP1AP1-201ENST00000594588 318 ntBASIC5.13□□□□□ -1.59
RFC3P40938 SUGT1P3-202ENST00000604259 383 ntBASIC5.13□□□□□ -1.59
RFC3P40938 PPATP2-201ENST00000605635 508 ntBASIC5.13□□□□□ -1.59
RFC3P40938 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 MIR8080-201ENST00000622224 89 ntBASIC5.13□□□□□ -1.59
RFC3P40938 MIR6719-201ENST00000622428 87 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AC132068.1-201ENST00000623805 459 ntBASIC5.13□□□□□ -1.59
RFC3P40938 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.13□□□□□ -1.59
RFC3P40938 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.13□□□□□ -1.59
RFC3P40938 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFC3P40938 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.13□□□□□ -1.59
RFC3P40938 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.13□□□□□ -1.59
RFC3P40938 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFC3P40938 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 RNU1-77P-201ENST00000390868 162 ntBASIC5.12□□□□□ -1.59
RFC3P40938 EI24P3-201ENST00000399046 1062 ntBASIC5.12□□□□□ -1.59
RFC3P40938 AL358178.1-201ENST00000407698 397 ntBASIC5.12□□□□□ -1.59
RFC3P40938 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.12□□□□□ -1.59
RFC3P40938 NPM1P18-201ENST00000434232 732 ntBASIC5.12□□□□□ -1.59
RFC3P40938 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 MTND2P40-201ENST00000436718 841 ntBASIC5.12□□□□□ -1.59
RFC3P40938 SPRYD7P1-201ENST00000443861 570 ntBASIC5.12□□□□□ -1.59
RFC3P40938 AL606490.1-201ENST00000452266 765 ntBASIC5.12□□□□□ -1.59
RFC3P40938 MEMO1P4-201ENST00000453590 386 ntBASIC5.12□□□□□ -1.59
RFC3P40938 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.12□□□□□ -1.59
RFC3P40938 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 RN7SL515P-201ENST00000463999 297 ntBASIC5.12□□□□□ -1.59
RFC3P40938 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.12□□□□□ -1.59
RFC3P40938 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.12□□□□□ -1.59
RFC3P40938 IGLV3-24-201ENST00000517477 197 ntBASIC5.12□□□□□ -1.59
RFC3P40938 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.12□□□□□ -1.59
RFC3P40938 AC068993.1-201ENST00000546724 589 ntBASIC5.12□□□□□ -1.59
RFC3P40938 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 AC015720.2-201ENST00000567709 334 ntBASIC5.12□□□□□ -1.59
RFC3P40938 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 AC010245.2-201ENST00000606908 1167 ntBASIC5.12□□□□□ -1.59
RFC3P40938 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.12□□□□□ -1.59
RFC3P40938 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms