Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.31□□□□□ -1.4
CIITAP33076 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.31□□□□□ -1.4
CIITAP33076 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.31□□□□□ -1.4
CIITAP33076 AC010245.2-201ENST00000606908 1167 ntBASIC6.31□□□□□ -1.4
CIITAP33076 MIR6768-201ENST00000610734 72 ntBASIC6.31□□□□□ -1.4
CIITAP33076 AL118522.2-201ENST00000616045 615 ntBASIC6.31□□□□□ -1.4
CIITAP33076 AC132068.1-201ENST00000623805 459 ntBASIC6.31□□□□□ -1.4
CIITAP33076 AP001002.2-201ENST00000625137 386 ntBASIC6.31□□□□□ -1.4
CIITAP33076 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CIITAP33076 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CIITAP33076 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CIITAP33076 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CIITAP33076 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.31□□□□□ -1.4
CIITAP33076 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
CIITAP33076 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CIITAP33076 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.31□□□□□ -1.4
CIITAP33076 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CIITAP33076 MT-RNR2-201ENST00000387347 1559 ntBASIC6.31□□□□□ -1.4
CIITAP33076 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CIITAP33076 AC112255.1-201ENST00000624070 2493 ntBASIC6.31□□□□□ -1.4
CIITAP33076 CUL4AP1-201ENST00000514750 1863 ntBASIC6.3□□□□□ -1.4
CIITAP33076 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CIITAP33076 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 AC006206.1-201ENST00000544842 3387 ntBASIC6.3□□□□□ -1.4
CIITAP33076 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 MTHFD2P5-201ENST00000320415 844 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 RNA5SP234-201ENST00000363916 119 ntBASIC6.3□□□□□ -1.4
CIITAP33076 RN7SKP6-201ENST00000364795 319 ntBASIC6.3□□□□□ -1.4
CIITAP33076 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 MIR551A-201ENST00000385042 96 ntBASIC6.3□□□□□ -1.4
CIITAP33076 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.3□□□□□ -1.4
CIITAP33076 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 AC079355.1-201ENST00000421770 223 ntBASIC6.3□□□□□ -1.4
CIITAP33076 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 AC021876.1-201ENST00000425959 359 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.3□□□□□ -1.4
CIITAP33076 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.3□□□□□ -1.4
CIITAP33076 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.3□□□□□ -1.4
CIITAP33076 RANP1-206ENST00000455094 651 ntBASIC6.3□□□□□ -1.4
CIITAP33076 RPL35AP19-201ENST00000469425 329 ntBASIC6.3□□□□□ -1.4
CIITAP33076 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.3□□□□□ -1.4
CIITAP33076 EIF1P7-201ENST00000487533 337 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.3□□□□□ -1.4
CIITAP33076 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.3□□□□□ -1.4
CIITAP33076 AC130364.2-201ENST00000528639 604 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AC122688.1-201ENST00000541494 223 ntBASIC6.3□□□□□ -1.4
CIITAP33076 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
CIITAP33076 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.3□□□□□ -1.4
CIITAP33076 VN1R81P-201ENST00000602085 372 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.3□□□□□ -1.4
CIITAP33076 AC093388.1-201ENST00000609166 430 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AC015712.7-201ENST00000615211 635 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AL356752.1-201ENST00000615844 593 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AC253576.2-201ENST00000618815 580 ntBASIC6.3□□□□□ -1.4
CIITAP33076 AL049767.1-202ENST00000637826 242 ntBASIC6.3□□□□□ -1.4
CIITAP33076 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CIITAP33076 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CIITAP33076 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.3□□□□□ -1.4
CIITAP33076 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.29□□□□□ -1.4
CIITAP33076 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
CIITAP33076 AC123769.1-201ENST00000530992 3192 ntBASIC6.29□□□□□ -1.4
CIITAP33076 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CIITAP33076 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CIITAP33076 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CIITAP33076 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CIITAP33076 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 RNU2-72P-201ENST00000411175 163 ntBASIC6.29□□□□□ -1.4
CIITAP33076 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.29□□□□□ -1.4
CIITAP33076 CBX1P3-201ENST00000413296 527 ntBASIC6.29□□□□□ -1.4
CIITAP33076 MTCO3P43-201ENST00000440974 771 ntBASIC6.29□□□□□ -1.4
CIITAP33076 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.29□□□□□ -1.4
CIITAP33076 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.29□□□□□ -1.4
CIITAP33076 AZGP1P2-201ENST00000454506 345 ntBASIC6.29□□□□□ -1.4
CIITAP33076 RN7SL583P-201ENST00000475692 287 ntBASIC6.29□□□□□ -1.4
CIITAP33076 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.29□□□□□ -1.4
CIITAP33076 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.29□□□□□ -1.4
CIITAP33076 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CIITAP33076 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CIITAP33076 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.29□□□□□ -1.4
CIITAP33076 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.29□□□□□ -1.4
CIITAP33076 HNRNPCP1-201ENST00000556181 766 ntBASIC6.29□□□□□ -1.4
CIITAP33076 RN7SL753P-201ENST00000581238 290 ntBASIC6.29□□□□□ -1.4
CIITAP33076 MIR3176-201ENST00000582210 90 ntBASIC6.29□□□□□ -1.4
CIITAP33076 AP001357.1-201ENST00000586304 1053 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms