Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RHOT1P3-201ENST00000436571 331 ntBASIC6.48□□□□□ -1.37
POLR2AP24928 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.48□□□□□ -1.37
POLR2AP24928 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
POLR2AP24928 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
POLR2AP24928 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
POLR2AP24928 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.48□□□□□ -1.37
POLR2AP24928 CIR1P1-201ENST00000524055 1133 ntBASIC6.48□□□□□ -1.37
POLR2AP24928 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
POLR2AP24928 OR8X1P-201ENST00000534542 869 ntBASIC6.48□□□□□ -1.37
POLR2AP24928 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
POLR2AP24928 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.48□□□□□ -1.37
POLR2AP24928 AC025811.1-201ENST00000604312 472 ntBASIC6.48□□□□□ -1.37
POLR2AP24928 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.48□□□□□ -1.37
POLR2AP24928 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
POLR2AP24928 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
POLR2AP24928 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.47□□□□□ -1.37
POLR2AP24928 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.47□□□□□ -1.37
POLR2AP24928 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.47□□□□□ -1.37
POLR2AP24928 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
POLR2AP24928 AC006511.3-201ENST00000624929 1783 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.47□□□□□ -1.37
POLR2AP24928 RNY3P9-201ENST00000384727 106 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.47□□□□□ -1.37
POLR2AP24928 AL512661.1-201ENST00000434586 1253 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AL731534.1-201ENST00000434711 269 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 MTCO3P43-201ENST00000440974 771 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.47□□□□□ -1.37
POLR2AP24928 RAB9BP1-201ENST00000519581 626 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.47□□□□□ -1.37
POLR2AP24928 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
POLR2AP24928 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.47□□□□□ -1.37
POLR2AP24928 AGGF1P7-201ENST00000562369 913 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 VN1R87P-201ENST00000596706 487 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AC234771.5-201ENST00000600161 514 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AC024589.2-201ENST00000605642 1294 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 AC006946.3-201ENST00000609791 756 ntBASIC6.47□□□□□ -1.37
POLR2AP24928 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
POLR2AP24928 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
POLR2AP24928 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.47□□□□□ -1.37
POLR2AP24928 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
POLR2AP24928 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
POLR2AP24928 AC011933.2-201ENST00000578539 2790 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
POLR2AP24928 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
POLR2AP24928 RN7SKP149-201ENST00000363008 344 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.46□□□□□ -1.37
POLR2AP24928 RN7SKP126-201ENST00000411143 300 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.46□□□□□ -1.37
POLR2AP24928 NANOGP9-201ENST00000439890 892 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AC073648.4-201ENST00000442655 781 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.46□□□□□ -1.37
POLR2AP24928 TVP23BP2-201ENST00000455082 615 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC6.46□□□□□ -1.37
POLR2AP24928 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.46□□□□□ -1.37
POLR2AP24928 OR5AM1P-201ENST00000532136 1032 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AL512310.9-201ENST00000553311 948 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 BNIP3P19-201ENST00000605397 577 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 AC099654.9-201ENST00000637055 678 ntBASIC6.46□□□□□ -1.37
POLR2AP24928 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
POLR2AP24928 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.46□□□□□ -1.38
POLR2AP24928 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 NPM1P40-201ENST00000412758 733 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 COX6B1P1-201ENST00000415962 213 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.46□□□□□ -1.38
POLR2AP24928 MGAT2P2-201ENST00000427194 797 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC6.46□□□□□ -1.38
POLR2AP24928 RAD1P2-201ENST00000446414 663 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 MTND1P31-201ENST00000449206 961 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.46□□□□□ -1.38
POLR2AP24928 AC002075.1-201ENST00000457396 676 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 RPS7P6-201ENST00000485777 579 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.46□□□□□ -1.38
POLR2AP24928 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
POLR2AP24928 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.46□□□□□ -1.38
POLR2AP24928 AC005084.1-201ENST00000605160 304 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.46□□□□□ -1.38
POLR2AP24928 AC009704.2-201ENST00000618739 483 ntBASIC6.46□□□□□ -1.38
POLR2AP24928 AL138955.1-201ENST00000622881 1040 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms