Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC092111.2-201ENST00000611627 1414 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFRAP16234 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFRAP16234 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 AC113412.1-201ENST00000425840 504 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 AP000547.1-201ENST00000454360 617 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 OR2AF1P-201ENST00000454899 889 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 HMGN1P8-201ENST00000463578 288 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
PDGFRAP16234 SNRPCP3-201ENST00000474888 476 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFRAP16234 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.86□□□□□ -1.47
PDGFRAP16234 AC138866.2-201ENST00000508650 584 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.86□□□□□ -1.47
PDGFRAP16234 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 AC022404.1-201ENST00000555320 273 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.86□□□□□ -1.47
PDGFRAP16234 MIR4505-201ENST00000582238 73 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFRAP16234 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.86□□□□□ -1.47
PDGFRAP16234 AL451049.1-201ENST00000608672 497 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PDGFRAP16234 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 AC009962.1-201ENST00000567327 3813 ntBASIC5.86□□□□□ -1.47
PDGFRAP16234 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDGFRAP16234 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 MT-RNR2-201ENST00000387347 1559 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 AC114786.1-201ENST00000512892 1415 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDGFRAP16234 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PDGFRAP16234 AL513325.1-201ENST00000417716 1034 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFRAP16234 Z84478.1-201ENST00000438230 1219 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFRAP16234 LINC02210-201ENST00000444561 288 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AL450996.1-201ENST00000445574 1202 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 RPS27AP2-201ENST00000457576 465 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 RN7SL72P-201ENST00000460697 269 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 RPSAP39-201ENST00000467439 883 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFRAP16234 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFRAP16234 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFRAP16234 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFRAP16234 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFRAP16234 AC020937.1-201ENST00000519677 1013 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFRAP16234 OR5AM1P-201ENST00000532136 1032 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFRAP16234 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.85□□□□□ -1.47
PDGFRAP16234 AL049872.1-201ENST00000556323 322 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AL049874.4-201ENST00000557593 255 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.85□□□□□ -1.47
PDGFRAP16234 H3F3BP2-201ENST00000583907 357 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 OR7M1P-201ENST00000608946 533 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AC008115.3-201ENST00000614874 549 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AC015660.5-201ENST00000623238 564 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PDGFRAP16234 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 AC025470.1-201ENST00000510053 2032 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 AL360270.2-201ENST00000562952 5985 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
PDGFRAP16234 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.85□□□□□ -1.47
PDGFRAP16234 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.85□□□□□ -1.47
PDGFRAP16234 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDGFRAP16234 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDGFRAP16234 YES1P1-201ENST00000418510 1628 ntBASIC5.85□□□□□ -1.47
PDGFRAP16234 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
PDGFRAP16234 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PDGFRAP16234 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
PDGFRAP16234 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 AL355834.1-201ENST00000556602 3965 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PDGFRAP16234 RN7SKP185-201ENST00000362813 326 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFRAP16234 NPM1P37-201ENST00000403105 874 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 OR6E1P-201ENST00000414424 923 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AL354868.1-201ENST00000417077 482 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AC138761.5-201ENST00000433967 325 ntBASIC5.84□□□□□ -1.47
PDGFRAP16234 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.84□□□□□ -1.47
PDGFRAP16234 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms