Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN2BO60939 AC113412.1-201ENST00000425840 504 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN2BO60939 HSPD1P12-201ENST00000429127 1069 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 OR6D1P-201ENST00000436165 939 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN2BO60939 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN2BO60939 AC016772.1-201ENST00000444170 1261 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AC005297.1-201ENST00000444765 862 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN2BO60939 AL450023.1-201ENST00000450868 751 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 VDAC2P4-201ENST00000452925 711 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN2BO60939 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN2BO60939 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.18□□□□□ -1.58
SCN2BO60939 RNA5SP271-201ENST00000516700 88 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AP000859.1-201ENST00000525536 307 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN2BO60939 OR8G3P-201ENST00000533406 921 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN2BO60939 AL359219.2-201ENST00000555184 348 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN2BO60939 AP000769.2-201ENST00000602344 396 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 AP005431.1-201ENST00000618479 319 ntBASIC5.18□□□□□ -1.58
SCN2BO60939 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SCN2BO60939 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SCN2BO60939 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN2BO60939 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SCN2BO60939 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 AC092111.2-201ENST00000611627 1414 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN2BO60939 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN2BO60939 MIR621-201ENST00000384919 96 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 AC007068.1-201ENST00000396690 844 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 RPS3AP2-201ENST00000407190 754 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN2BO60939 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN2BO60939 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN2BO60939 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN2BO60939 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.17□□□□□ -1.58
SCN2BO60939 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN2BO60939 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.17□□□□□ -1.58
SCN2BO60939 AC016559.2-201ENST00000510759 359 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 NANOGNBP2-201ENST00000544753 553 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN2BO60939 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN2BO60939 RN7SL290P-201ENST00000578661 300 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN2BO60939 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN2BO60939 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN2BO60939 AL499605.1-201ENST00000604628 403 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN2BO60939 AC008833.1-201ENST00000611633 691 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 AC073575.2-201ENST00000614212 627 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 AL390318.1-201ENST00000624564 687 ntBASIC5.17□□□□□ -1.58
SCN2BO60939 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SCN2BO60939 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN2BO60939 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN2BO60939 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN2BO60939 AC019072.1-201ENST00000604535 1551 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN2BO60939 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SCN2BO60939 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SCN2BO60939 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN2BO60939 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN2BO60939 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.16□□□□□ -1.58
SCN2BO60939 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SCN2BO60939 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN2BO60939 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SCN2BO60939 AC023490.2-201ENST00000359859 470 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.16□□□□□ -1.58
SCN2BO60939 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SCN2BO60939 DBIP1-201ENST00000401435 260 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 RMRPP5-201ENST00000411156 267 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN2BO60939 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SCN2BO60939 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN2BO60939 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.16□□□□□ -1.58
SCN2BO60939 RPL12P18-201ENST00000437175 325 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 DNAJA1P5-201ENST00000440278 943 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 AC092106.1-201ENST00000444291 373 ntBASIC5.16□□□□□ -1.58
SCN2BO60939 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
SCN2BO60939 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms