Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.75□□□□□ -1.49
SMAD6O43541 AC098826.2-201ENST00000452011 651 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 AC018638.3-201ENST00000461273 132 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.75□□□□□ -1.49
SMAD6O43541 AC104849.1-201ENST00000462623 405 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AL136038.1-201ENST00000497246 351 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 RN7SL466P-201ENST00000497546 295 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 DUTP7-201ENST00000507982 486 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AC011411.1-201ENST00000509592 876 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.75□□□□□ -1.49
SMAD6O43541 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SMAD6O43541 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SMAD6O43541 AGGF1P7-201ENST00000562369 913 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 AL163952.1-202ENST00000569625 600 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.75□□□□□ -1.49
SMAD6O43541 DNAJC19P3-201ENST00000594491 331 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.75□□□□□ -1.49
SMAD6O43541 AC016597.2-201ENST00000613256 341 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AC091046.2-201ENST00000620775 665 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AL691477.1-201ENST00000624398 162 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SMAD6O43541 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.75□□□□□ -1.49
SMAD6O43541 AC099654.6-201ENST00000636487 512 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 AL049767.1-202ENST00000637826 242 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.75□□□□□ -1.49
SMAD6O43541 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.75□□□□□ -1.49
SMAD6O43541 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.75□□□□□ -1.49
SMAD6O43541 CASC19-255ENST00000641733 1385 ntBASIC5.75□□□□□ -1.49
SMAD6O43541 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.75□□□□□ -1.49
SMAD6O43541 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SMAD6O43541 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SMAD6O43541 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SMAD6O43541 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 AL133173.1-201ENST00000423458 397 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 TNPO1P1-201ENST00000423641 1138 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 VN1R21P-201ENST00000426703 765 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AL121776.1-201ENST00000429337 372 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC012075.1-201ENST00000436549 580 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AL450996.1-201ENST00000445574 1202 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 VN1R96P-201ENST00000446052 858 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AL353718.1-201ENST00000451028 517 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 SNRPCP3-201ENST00000474888 476 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC025181.1-201ENST00000477507 416 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC015908.1-201ENST00000478739 476 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 RPS7P6-201ENST00000485777 579 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 AC106806.2-201ENST00000509365 500 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC008126.1-201ENST00000549019 480 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.74□□□□□ -1.49
SMAD6O43541 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 AC010615.3-201ENST00000597319 394 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.74□□□□□ -1.49
SMAD6O43541 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SMAD6O43541 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SMAD6O43541 AC090772.4-201ENST00000623599 362 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC007683.2-201ENST00000624681 714 ntBASIC5.74□□□□□ -1.49
SMAD6O43541 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5.74□□□□□ -1.49
SMAD6O43541 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms