Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.46□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 MRE11P1-201ENST00000464884 2127 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC002525.1-201ENST00000624392 1622 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 MIR551A-201ENST00000385042 96 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 NPM1P38-201ENST00000403835 865 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 HMGN2P27-201ENST00000427352 270 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 CYCSP51-201ENST00000443545 318 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 RSU1P1-201ENST00000453416 441 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 MEMO1P4-201ENST00000453590 386 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC079080.1-201ENST00000479841 822 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPS21P4-201ENST00000487122 248 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 COX6B1P2-201ENST00000489624 230 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC024558.1-201ENST00000505008 528 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SKP99-201ENST00000517028 307 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL359513.1-201ENST00000614364 557 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 AF117829.2-201ENST00000619538 361 ntBASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC005261.6-201ENST00000623072 1387 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SKP28-201ENST00000364770 305 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC007394.1-201ENST00000421941 531 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 VN1R21P-201ENST00000426703 765 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF733P-202ENST00000444809 1573 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC023271.1-201ENST00000445936 1090 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SL329P-201ENST00000467740 299 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPL38P3-201ENST00000484463 213 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC073610.1-201ENST00000489971 396 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SL447P-201ENST00000494711 245 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 MORF4L2P1-201ENST00000503761 858 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 HIGD1AP14-201ENST00000507617 282 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC147055.3-201ENST00000510547 851 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNA5SP92-201ENST00000516437 110 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC118658.2-201ENST00000618697 459 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TMX2-CTNND1H3BSU7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms