Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AL591438.1-201ENST00000433508 581 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC007679.3-201ENST00000434035 414 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC234771.2-201ENST00000445718 597 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC002553.2-201ENST00000453217 340 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 RBMY2HP-201ENST00000457961 720 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 SEPT14P1-201ENST00000458703 648 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 RN7SL570P-201ENST00000484405 292 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 RN7SL290P-201ENST00000578661 300 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC011891.2-201ENST00000604949 397 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AL078624.2-201ENST00000605063 554 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 FAM27E2-201ENST00000619668 403 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 HSPA8P18-201ENST00000439846 1928 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC120338.1-201ENST00000625074 1541 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
KCNIP3Q9Y2W7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC068870.1-201ENST00000563737 2455 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 OR1L6-202ENST00000373684 1044 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 MIR27A-201ENST00000385073 78 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 HMGN1P32-201ENST00000441744 256 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 SEPT7P6-201ENST00000469999 1143 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF519P4-201ENST00000514008 125 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC131935.1-201ENST00000524621 333 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AP001000.1-201ENST00000526843 742 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 SLC25A51P2-201ENST00000535708 889 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 DUX4L52-201ENST00000549363 777 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC084033.1-201ENST00000550830 633 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AL080312.2-201ENST00000613001 630 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AP001962.1-201ENST00000624114 559 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 AL034370.1-201ENST00000397254 1590 ntBASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
KCNIP3Q9Y2W7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms