Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
RTP4Q96DX8 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.71□□□□□ -1.49
RTP4Q96DX8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.71□□□□□ -1.49
RTP4Q96DX8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
RTP4Q96DX8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 MIR133A2-201ENST00000347538 102 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 MIR375-201ENST00000362103 64 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 SNORA70.6-201ENST00000383934 134 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AL009179.1-201ENST00000406085 265 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AL136231.1-201ENST00000429407 730 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 RPL7P56-201ENST00000429441 717 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 HSFY7P-201ENST00000432672 318 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 HSFY8P-201ENST00000437934 318 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 IGBP1P3-201ENST00000447449 1000 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 HSFY5P-201ENST00000453726 309 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AL136038.1-201ENST00000497246 351 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 SNORA70.20-201ENST00000516848 126 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC090022.1-201ENST00000546569 311 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC090330.1-201ENST00000588646 764 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC025574.2-201ENST00000615621 514 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC009452.1-201ENST00000640823 606 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
RTP4Q96DX8 AC109446.4-201ENST00000623235 2755 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTP4Q96DX8 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.71□□□□□ -1.5
RTP4Q96DX8 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 DNM1P47-203ENST00000571780 12667 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 RNA5SP131-201ENST00000365452 119 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 GABARAPL3-201ENST00000412799 354 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL513325.1-201ENST00000417716 1034 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL121776.1-201ENST00000429337 372 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 SUMO2P3-201ENST00000438311 288 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL451063.1-201ENST00000450164 1133 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 OR8K2P-201ENST00000524645 927 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 HMGB1P42-201ENST00000532126 553 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC010547.6-201ENST00000571789 193 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC015802.2-201ENST00000589690 189 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AL049840.6-201ENST00000604583 345 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC104307.1-201ENST00000616142 196 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC106858.1-201ENST00000637497 429 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 AC130360.2-201ENST00000533477 1556 ntBASIC5.7□□□□□ -1.5
RTP4Q96DX8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.7□□□□□ -1.5
RTP4Q96DX8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTP4Q96DX8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms