Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TPRKBP1-201ENST00000456243 481 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 OR52A4P-202ENST00000481634 799 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 SNRPCP11-201ENST00000492453 205 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 RNA5SP441-201ENST00000516809 88 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC018442.3-201ENST00000523025 183 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AP001000.1-201ENST00000526843 742 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AP002373.2-201ENST00000541631 1060 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC137627.1-201ENST00000545761 289 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC018552.1-201ENST00000562099 811 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL078601.3-201ENST00000573303 535 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AP005119.1-201ENST00000580956 292 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 WBP1LP11-201ENST00000586141 328 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AL133247.2-201ENST00000603236 482 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AC104307.1-201ENST00000616142 196 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 NXF4-202ENST00000416098 1465 ntBASIC5.5□□□□□ -1.53
VPS33AQ96AX1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VPS33AQ96AX1 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AP001029.2-203ENST00000589795 4910 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RNU4-39P-201ENST00000362455 127 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RN7SKP145-201ENST00000363291 303 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RNU6-883P-201ENST00000384597 107 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 EI24P3-201ENST00000399046 1062 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 YWHAZP6-201ENST00000399764 738 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC096921.1-201ENST00000411661 375 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 GABARAPL3-201ENST00000412799 354 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RPA2P2-201ENST00000419698 796 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 OR10T1P-201ENST00000424327 947 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RPSAP32-201ENST00000432681 526 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MEMO1P4-201ENST00000453590 386 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL133244.1-201ENST00000456007 258 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RPL5P13-201ENST00000462840 709 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 RPS7P6-201ENST00000485777 579 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 DUTP1-201ENST00000493631 470 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MAST4-IT1-201ENST00000514241 658 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MTCYBP19-201ENST00000517463 1124 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC116917.1-201ENST00000520558 305 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC091078.2-201ENST00000557145 559 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MT1CP-201ENST00000567054 174 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC068020.1-201ENST00000594215 661 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC130352.1-201ENST00000602979 661 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL139099.4-201ENST00000614802 114 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MIR6133-201ENST00000617057 108 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL162233.1-201ENST00000620014 944 ntBASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms