Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 AC016027.4-201ENST00000450866 277 ntBASIC4.83□□□□□ -1.64
UBA52P62987 AC006539.1-201ENST00000481419 501 ntBASIC4.83□□□□□ -1.64
UBA52P62987 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 IGKV2-18-201ENST00000522607 343 ntBASIC4.83□□□□□ -1.64
UBA52P62987 OR56A7P-201ENST00000524865 941 ntBASIC4.83□□□□□ -1.64
UBA52P62987 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
UBA52P62987 AL356801.1-201ENST00000559320 294 ntBASIC4.83□□□□□ -1.64
UBA52P62987 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.83□□□□□ -1.64
UBA52P62987 MIR1273E-201ENST00000581165 102 ntBASIC4.83□□□□□ -1.64
UBA52P62987 MIR7853-201ENST00000584820 132 ntBASIC4.83□□□□□ -1.64
UBA52P62987 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.83□□□□□ -1.64
UBA52P62987 Z95327.3-201ENST00000610385 572 ntBASIC4.83□□□□□ -1.64
UBA52P62987 AC096861.1-201ENST00000616652 240 ntBASIC4.83□□□□□ -1.64
UBA52P62987 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 AL357562.1-201ENST00000624911 609 ntBASIC4.83□□□□□ -1.64
UBA52P62987 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.83□□□□□ -1.64
UBA52P62987 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
UBA52P62987 AC006600.2-201ENST00000624834 2506 ntBASIC4.83□□□□□ -1.64
UBA52P62987 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.83□□□□□ -1.64
UBA52P62987 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.83□□□□□ -1.64
UBA52P62987 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.83□□□□□ -1.64
UBA52P62987 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
UBA52P62987 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.82□□□□□ -1.64
UBA52P62987 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.82□□□□□ -1.64
UBA52P62987 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.82□□□□□ -1.64
UBA52P62987 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.82□□□□□ -1.64
UBA52P62987 RN7SKP160-201ENST00000363804 340 ntBASIC4.82□□□□□ -1.64
UBA52P62987 RNU1-136P-201ENST00000384181 164 ntBASIC4.82□□□□□ -1.64
UBA52P62987 OR2AT2P-201ENST00000413438 905 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 RPL35AP3-201ENST00000414680 288 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 AC126120.1-201ENST00000431082 470 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 AC096775.1-201ENST00000437724 448 ntBASIC4.82□□□□□ -1.64
UBA52P62987 OR52E3P-201ENST00000452083 936 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.82□□□□□ -1.64
UBA52P62987 AL603882.1-201ENST00000463059 681 ntBASIC4.82□□□□□ -1.64
UBA52P62987 RN7SL269P-201ENST00000467795 305 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AC083795.1-201ENST00000491760 320 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 AC127381.1-201ENST00000555979 939 ntBASIC4.82□□□□□ -1.64
UBA52P62987 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 AC104695.2-201ENST00000605056 775 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AC141002.1-201ENST00000607025 279 ntBASIC4.82□□□□□ -1.64
UBA52P62987 AL139124.1-201ENST00000609123 421 ntBASIC4.82□□□□□ -1.64
UBA52P62987 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 AL691477.1-201ENST00000624398 162 ntBASIC4.82□□□□□ -1.64
UBA52P62987 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
UBA52P62987 AC025574.1-201ENST00000554784 1653 ntBASIC4.82□□□□□ -1.64
UBA52P62987 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
UBA52P62987 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.82□□□□□ -1.64
UBA52P62987 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.82□□□□□ -1.64
UBA52P62987 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
UBA52P62987 ADAM5-202ENST00000399789 1942 ntBASIC4.82□□□□□ -1.64
UBA52P62987 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
UBA52P62987 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.81□□□□□ -1.64
UBA52P62987 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
UBA52P62987 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
UBA52P62987 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.81□□□□□ -1.64
UBA52P62987 RNA5SP375-201ENST00000362975 119 ntBASIC4.81□□□□□ -1.64
UBA52P62987 RNA5SP91-201ENST00000390902 119 ntBASIC4.81□□□□□ -1.64
UBA52P62987 NPM1P38-201ENST00000403835 865 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AC016739.1-201ENST00000405359 345 ntBASIC4.81□□□□□ -1.64
UBA52P62987 SNRPEP6-201ENST00000407465 277 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AC211486.3-201ENST00000412694 621 ntBASIC4.81□□□□□ -1.64
UBA52P62987 SETP15-201ENST00000412724 337 ntBASIC4.81□□□□□ -1.64
UBA52P62987 RPS15AP30-201ENST00000420976 390 ntBASIC4.81□□□□□ -1.64
UBA52P62987 MGAT2P2-201ENST00000427194 797 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.81□□□□□ -1.64
UBA52P62987 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.81□□□□□ -1.64
UBA52P62987 LINC02210-201ENST00000444561 288 ntBASIC4.81□□□□□ -1.64
UBA52P62987 AL163193.1-201ENST00000444895 788 ntBASIC4.81□□□□□ -1.64
UBA52P62987 TPT1P1-201ENST00000458495 518 ntBASIC4.81□□□□□ -1.64
UBA52P62987 SNORD125-201ENST00000459538 96 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms