Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 MIR551A-201ENST00000385042 96 ntBASIC4.63□□□□□ -1.67
LMO4P61968 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 SPTLC1P2-201ENST00000407089 121 ntBASIC4.63□□□□□ -1.67
LMO4P61968 RNU4-34P-201ENST00000410431 124 ntBASIC4.63□□□□□ -1.67
LMO4P61968 DPPA2P3-201ENST00000411853 655 ntBASIC4.63□□□□□ -1.67
LMO4P61968 VN1R31P-201ENST00000417498 730 ntBASIC4.63□□□□□ -1.67
LMO4P61968 SFR1P2-201ENST00000421841 730 ntBASIC4.63□□□□□ -1.67
LMO4P61968 AL390879.2-203ENST00000426943 1121 ntBASIC4.63□□□□□ -1.67
LMO4P61968 RPL7L1P9-201ENST00000431298 745 ntBASIC4.63□□□□□ -1.67
LMO4P61968 AC092473.1-201ENST00000441098 221 ntBASIC4.63□□□□□ -1.67
LMO4P61968 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.63□□□□□ -1.67
LMO4P61968 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 RN7SL515P-201ENST00000463999 297 ntBASIC4.63□□□□□ -1.67
LMO4P61968 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 RPL7P39-201ENST00000481157 744 ntBASIC4.63□□□□□ -1.67
LMO4P61968 RN7SL727P-201ENST00000482164 296 ntBASIC4.63□□□□□ -1.67
LMO4P61968 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 SUMO2P4-201ENST00000504193 276 ntBASIC4.63□□□□□ -1.67
LMO4P61968 HAUS1P1-201ENST00000505275 832 ntBASIC4.63□□□□□ -1.67
LMO4P61968 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 AC118282.1-201ENST00000506408 765 ntBASIC4.63□□□□□ -1.67
LMO4P61968 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.63□□□□□ -1.67
LMO4P61968 RNU6-415P-201ENST00000516252 97 ntBASIC4.63□□□□□ -1.67
LMO4P61968 RNA5SP92-201ENST00000516437 110 ntBASIC4.63□□□□□ -1.67
LMO4P61968 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.63□□□□□ -1.67
LMO4P61968 AC139697.1-201ENST00000548429 745 ntBASIC4.63□□□□□ -1.67
LMO4P61968 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC4.63□□□□□ -1.67
LMO4P61968 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.63□□□□□ -1.67
LMO4P61968 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.63□□□□□ -1.67
LMO4P61968 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.63□□□□□ -1.67
LMO4P61968 QTRT1P1-201ENST00000604344 1078 ntBASIC4.63□□□□□ -1.67
LMO4P61968 KATNBL1P1-201ENST00000605192 748 ntBASIC4.63□□□□□ -1.67
LMO4P61968 AC211433.2-201ENST00000608433 387 ntBASIC4.63□□□□□ -1.67
LMO4P61968 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LMO4P61968 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.63□□□□□ -1.67
LMO4P61968 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.63□□□□□ -1.67
LMO4P61968 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC4.63□□□□□ -1.67
LMO4P61968 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LMO4P61968 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC4.63□□□□□ -1.67
LMO4P61968 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LMO4P61968 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 C4BPAP1-201ENST00000415474 1893 ntBASIC4.62□□□□□ -1.67
LMO4P61968 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LMO4P61968 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 RNU6-1331P-201ENST00000363658 106 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AL009179.1-201ENST00000406085 265 ntBASIC4.62□□□□□ -1.67
LMO4P61968 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.62□□□□□ -1.67
LMO4P61968 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.62□□□□□ -1.67
LMO4P61968 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 SLC35E1P1-201ENST00000419313 864 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC073410.1-201ENST00000435125 589 ntBASIC4.62□□□□□ -1.67
LMO4P61968 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.62□□□□□ -1.67
LMO4P61968 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 RPS4XP1-201ENST00000482189 787 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.62□□□□□ -1.67
LMO4P61968 AC093763.2-201ENST00000505334 1223 ntBASIC4.62□□□□□ -1.67
LMO4P61968 PGAM1P13-201ENST00000507497 754 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 RFPL4AP3-201ENST00000515267 345 ntBASIC4.62□□□□□ -1.67
LMO4P61968 RN7SKP99-201ENST00000517028 307 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.62□□□□□ -1.67
LMO4P61968 OR8K2P-201ENST00000524645 927 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AP001804.1-201ENST00000526868 919 ntBASIC4.62□□□□□ -1.67
LMO4P61968 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LMO4P61968 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LMO4P61968 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.62□□□□□ -1.67
LMO4P61968 AC004825.1-201ENST00000555068 586 ntBASIC4.62□□□□□ -1.67
LMO4P61968 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 MTND4LP25-201ENST00000570218 163 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 DHFRP1-201ENST00000579682 559 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.62□□□□□ -1.67
LMO4P61968 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
LMO4P61968 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 HIRAP1-201ENST00000605318 787 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC138473.1-201ENST00000605717 526 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC000068.2-201ENST00000608816 460 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC110792.4-201ENST00000609843 298 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms