Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL139805.1-201ENST00000407837 289 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC096775.1-201ENST00000437724 448 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 AL031681.1-201ENST00000443304 400 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 WDR82P2-201ENST00000444540 928 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AL512593.1-201ENST00000444758 779 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 ZNF619P1-201ENST00000446539 752 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 RPL12P39-201ENST00000455456 496 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 RPS26P39-201ENST00000469206 341 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AK5-208ENST00000478255 556 ntTSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 AC083829.1-201ENST00000503756 657 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AC008629.2-201ENST00000503783 483 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 TCP11X3P-202ENST00000514289 1254 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 MIR2117-201ENST00000516780 80 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC3.93□□□□□ -1.78
CKS1BP61024 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 IGKV1OR22-1-201ENST00000521497 360 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.93□□□□□ -1.78
CKS1BP61024 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC3.93□□□□□ -1.78
CKS1BP61024 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC3.93□□□□□ -1.78
CKS1BP61024 NANOGP3-201ENST00000605855 286 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 AL356752.1-201ENST00000615844 593 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AL355974.3-201ENST00000617383 467 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 AL158062.1-201ENST00000619632 745 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 AL122023.1-201ENST00000622847 530 ntBASIC3.93□□□□□ -1.78
CKS1BP61024 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC3.93□□□□□ -1.78
CKS1BP61024 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CKS1BP61024 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CKS1BP61024 CR382285.2-201ENST00000624662 1495 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 MTND4P26-201ENST00000415971 1359 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CKS1BP61024 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 RNU1-134P-201ENST00000362935 165 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 RNA5SP85-201ENST00000365378 119 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 SSR1P1-201ENST00000407630 814 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC130360.1-201ENST00000425489 1117 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC009784.1-201ENST00000426484 460 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC010086.1-201ENST00000437359 1052 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 RPEP4-201ENST00000437636 602 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 RPS18P1-201ENST00000447840 458 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC097359.1-201ENST00000447946 463 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 MTND4LP12-201ENST00000448237 295 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CKS1BP61024 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC3.92□□□□□ -1.78
CKS1BP61024 RBMY2HP-201ENST00000457961 720 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 RN7SL393P-201ENST00000463588 296 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 PSAT1P4-201ENST00000466500 526 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 CCDC75P1-201ENST00000469247 791 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC099521.1-201ENST00000482557 334 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AP002453.1-201ENST00000492327 668 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC117500.1-201ENST00000497352 755 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC093325.1-201ENST00000508378 326 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 SNX18P25-201ENST00000510539 758 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 RNA5SP497-201ENST00000516081 97 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC130365.2-201ENST00000525882 1201 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.92□□□□□ -1.78
CKS1BP61024 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CKS1BP61024 BNIP3P1-201ENST00000547295 580 ntBASIC3.92□□□□□ -1.78
CKS1BP61024 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC3.92□□□□□ -1.78
CKS1BP61024 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms