Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.5□□□□□ -1.53
PDX1P52945 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PDX1P52945 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.5□□□□□ -1.53
PDX1P52945 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 RNA5SP183-201ENST00000362452 119 ntBASIC5.5□□□□□ -1.53
PDX1P52945 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 AC009804.1-201ENST00000400949 179 ntBASIC5.5□□□□□ -1.53
PDX1P52945 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.5□□□□□ -1.53
PDX1P52945 AC019070.1-201ENST00000415008 1024 ntBASIC5.5□□□□□ -1.53
PDX1P52945 MTND4LP21-201ENST00000415303 295 ntBASIC5.5□□□□□ -1.53
PDX1P52945 NENFP1-201ENST00000419476 466 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.5□□□□□ -1.53
PDX1P52945 CNOT7P2-201ENST00000441051 832 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC015983.1-201ENST00000441577 373 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AL450023.1-201ENST00000450868 751 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AL606490.1-201ENST00000452266 765 ntBASIC5.5□□□□□ -1.53
PDX1P52945 OSTCP1-201ENST00000455507 450 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC002075.1-201ENST00000457396 676 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC005532.2-201ENST00000467154 373 ntBASIC5.5□□□□□ -1.53
PDX1P52945 RN7SL826P-201ENST00000479724 288 ntBASIC5.5□□□□□ -1.53
PDX1P52945 COX6B1P2-201ENST00000489624 230 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC024558.1-201ENST00000505008 528 ntBASIC5.5□□□□□ -1.53
PDX1P52945 ACTR6P1-201ENST00000514311 1104 ntBASIC5.5□□□□□ -1.53
PDX1P52945 RNU6-1334P-201ENST00000516032 105 ntBASIC5.5□□□□□ -1.53
PDX1P52945 snoU109.5-201ENST00000516231 132 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.5□□□□□ -1.53
PDX1P52945 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.5□□□□□ -1.53
PDX1P52945 HSPE1P2-201ENST00000554777 306 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC096996.1-201ENST00000563813 325 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC007346.2-201ENST00000564816 892 ntBASIC5.5□□□□□ -1.53
PDX1P52945 RBM22P12-201ENST00000567098 1255 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.5□□□□□ -1.53
PDX1P52945 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.5□□□□□ -1.53
PDX1P52945 MIR7155-201ENST00000615925 56 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC003001.2-201ENST00000616294 831 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC006213.5-201ENST00000619673 288 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC008115.4-201ENST00000619780 775 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.5□□□□□ -1.53
PDX1P52945 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 AL592429.1-201ENST00000403909 1473 ntBASIC5.5□□□□□ -1.53
PDX1P52945 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
PDX1P52945 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PDX1P52945 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PDX1P52945 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 RPL12P43-201ENST00000420608 499 ntBASIC5.49□□□□□ -1.53
PDX1P52945 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 AL590399.2-201ENST00000427536 309 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.49□□□□□ -1.53
PDX1P52945 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 AL450996.1-201ENST00000445574 1202 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.49□□□□□ -1.53
PDX1P52945 OR7E116P-201ENST00000448529 957 ntBASIC5.49□□□□□ -1.53
PDX1P52945 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 LDHBP2-201ENST00000456969 1005 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AC004129.2-201ENST00000457229 287 ntBASIC5.49□□□□□ -1.53
PDX1P52945 snoU13.29-201ENST00000459370 104 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AC087672.1-201ENST00000479876 766 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 HIGD1AP14-201ENST00000507617 282 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PDX1P52945 AC090424.1-201ENST00000535243 736 ntBASIC5.49□□□□□ -1.53
PDX1P52945 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.49□□□□□ -1.53
PDX1P52945 MIR4700-201ENST00000578311 74 ntBASIC5.49□□□□□ -1.53
PDX1P52945 MIR4420-201ENST00000583944 77 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 AC022387.2-201ENST00000604050 448 ntBASIC5.49□□□□□ -1.53
PDX1P52945 PPATP2-201ENST00000605635 508 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AL512329.2-201ENST00000607350 548 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AL356752.1-201ENST00000615844 593 ntBASIC5.49□□□□□ -1.53
PDX1P52945 AC005899.7-201ENST00000618199 588 ntBASIC5.49□□□□□ -1.53
PDX1P52945 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PDX1P52945 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms