Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RN7SKP81-201ENST00000365603 331 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NKX2-1P43699 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC003045.1-201ENST00000398779 713 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 RPL5P19-201ENST00000404228 893 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 GPS2P1-201ENST00000411761 986 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX2-1P43699 MTND2P15-201ENST00000418575 892 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 OSTCP4-201ENST00000424397 449 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 MORF4L1P7-201ENST00000426038 703 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 ELOCP6-201ENST00000429066 328 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 FTLP19-201ENST00000433300 394 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 RPL5P25-201ENST00000441148 775 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AL158053.1-201ENST00000441503 453 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AL031681.1-201ENST00000443304 400 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 OR2L9P-201ENST00000444456 913 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC010240.2-201ENST00000445363 1205 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 GXYLT1P1-201ENST00000446657 490 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC097359.1-201ENST00000447946 463 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 MEMO1P4-201ENST00000453590 386 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 HSPE1P22-201ENST00000456856 327 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 LDHBP2-201ENST00000456969 1005 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 ELOCP12-201ENST00000458706 328 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC078857.1-201ENST00000469870 667 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 NPM1P17-201ENST00000479221 602 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 RPL34P33-201ENST00000486062 334 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 RNU2-45P-201ENST00000516068 187 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 RNA5SP434-201ENST00000516647 121 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 ODF1-202ENST00000518835 368 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 ASB8-203ENST00000535988 679 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AL512310.9-201ENST00000553311 948 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC037479.1-201ENST00000558361 625 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC122134.1-201ENST00000565664 1104 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC024267.2-201ENST00000582737 417 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.76□□□□□ -1.65
NKX2-1P43699 BNIP3P27-201ENST00000599991 412 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC120053.1-201ENST00000607706 736 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AL451049.1-201ENST00000608672 497 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AL445493.3-201ENST00000619568 477 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AC112198.2-201ENST00000426589 6996 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AP000473.2-201ENST00000602659 1537 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.76□□□□□ -1.65
NKX2-1P43699 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
NKX2-1P43699 AP004607.3-201ENST00000530354 3915 ntBASIC4.76□□□□□ -1.65
NKX2-1P43699 AC002525.1-201ENST00000624392 1622 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
NKX2-1P43699 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NKX2-1P43699 EIF3EP1-201ENST00000433978 1316 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AC015689.2-201ENST00000528172 1738 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-1P43699 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-1P43699 RNA5SP485-201ENST00000365053 119 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.75□□□□□ -1.65
NKX2-1P43699 AL157702.1-201ENST00000398764 426 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AL353692.2-201ENST00000407054 335 ntBASIC4.75□□□□□ -1.65
NKX2-1P43699 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.75□□□□□ -1.65
NKX2-1P43699 UBTFL2-201ENST00000411859 1191 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms