Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 VN1R96P-201ENST00000446052 858 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
XRCC1P18887 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 RNA5SP362-201ENST00000516048 118 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 SEPT10P1-201ENST00000517342 1162 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
XRCC1P18887 AC022467.1-201ENST00000614738 749 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 AL035661.1-201ENST00000620459 1144 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 AC021766.1-201ENST00000624404 741 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
XRCC1P18887 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
XRCC1P18887 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
XRCC1P18887 ABCC13-202ENST00000463099 3842 ntBASIC5.52□□□□□ -1.53
XRCC1P18887 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.52□□□□□ -1.53
XRCC1P18887 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
XRCC1P18887 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.51□□□□□ -1.53
XRCC1P18887 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 RN7SKP160-201ENST00000363804 340 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.51□□□□□ -1.53
XRCC1P18887 HYALP1-201ENST00000417674 1279 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AL133173.1-201ENST00000423458 397 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.51□□□□□ -1.53
XRCC1P18887 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.51□□□□□ -1.53
XRCC1P18887 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.51□□□□□ -1.53
XRCC1P18887 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AL450023.1-201ENST00000450868 751 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.51□□□□□ -1.53
XRCC1P18887 DUTP1-201ENST00000493631 470 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
XRCC1P18887 ATP5LP3-201ENST00000514223 304 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.51□□□□□ -1.53
XRCC1P18887 HSPE1P2-201ENST00000554777 306 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AL359219.2-201ENST00000555184 348 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AGGF1P7-201ENST00000562369 913 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AC007225.2-201ENST00000562529 256 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 RBM22P12-201ENST00000567098 1255 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AC015720.2-201ENST00000567709 334 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 MIR4660-201ENST00000583549 74 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 AC010503.3-201ENST00000594355 540 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.51□□□□□ -1.53
XRCC1P18887 AC010632.3-201ENST00000611377 369 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 AC006206.1-201ENST00000544842 3387 ntBASIC5.51□□□□□ -1.53
XRCC1P18887 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
XRCC1P18887 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
XRCC1P18887 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
XRCC1P18887 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.5□□□□□ -1.53
XRCC1P18887 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.5□□□□□ -1.53
XRCC1P18887 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
XRCC1P18887 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.5□□□□□ -1.53
XRCC1P18887 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.5□□□□□ -1.53
XRCC1P18887 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
XRCC1P18887 RPS17P5-201ENST00000498293 408 ntBASIC5.5□□□□□ -1.53
XRCC1P18887 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.5□□□□□ -1.53
XRCC1P18887 AC137627.1-201ENST00000545761 289 ntBASIC5.5□□□□□ -1.53
XRCC1P18887 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.5□□□□□ -1.53
XRCC1P18887 AC018809.2-201ENST00000602436 3823 ntBASIC5.5□□□□□ -1.53
XRCC1P18887 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.5□□□□□ -1.53
XRCC1P18887 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms