Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 RNU1-134P-201ENST00000362935 165 ntBASIC5.58□□□□□ -1.52
LDLRP01130 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LDLRP01130 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LDLRP01130 NDUFS5P5-201ENST00000437256 321 ntBASIC5.58□□□□□ -1.52
LDLRP01130 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 MED28P3-201ENST00000444288 531 ntBASIC5.58□□□□□ -1.52
LDLRP01130 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 RN7SL193P-201ENST00000491708 276 ntBASIC5.58□□□□□ -1.52
LDLRP01130 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.58□□□□□ -1.52
LDLRP01130 CR383658.1-201ENST00000514609 734 ntBASIC5.58□□□□□ -1.52
LDLRP01130 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AL121594.2-201ENST00000541658 472 ntBASIC5.58□□□□□ -1.52
LDLRP01130 AC022404.1-201ENST00000555320 273 ntBASIC5.58□□□□□ -1.52
LDLRP01130 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.58□□□□□ -1.52
LDLRP01130 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 SUMO2P15-201ENST00000604285 278 ntBASIC5.58□□□□□ -1.52
LDLRP01130 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.58□□□□□ -1.52
LDLRP01130 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.58□□□□□ -1.52
LDLRP01130 uc_338.26-201ENST00000612659 160 ntBASIC5.58□□□□□ -1.52
LDLRP01130 AC091948.2-201ENST00000636510 279 ntBASIC5.58□□□□□ -1.52
LDLRP01130 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.58□□□□□ -1.52
LDLRP01130 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.58□□□□□ -1.52
LDLRP01130 GVINP1-202ENST00000531871 7271 ntBASIC5.58□□□□□ -1.52
LDLRP01130 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LDLRP01130 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 OR51C1P-202ENST00000641159 1444 ntBASIC5.57□□□□□ -1.52
LDLRP01130 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.57□□□□□ -1.52
LDLRP01130 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.57□□□□□ -1.52
LDLRP01130 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LDLRP01130 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 OR13C1P-202ENST00000641378 2919 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AC005005.4-201ENST00000623789 16698 ntBASIC5.57□□□□□ -1.52
LDLRP01130 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 MTHFD2P5-201ENST00000320415 844 ntBASIC5.57□□□□□ -1.52
LDLRP01130 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LDLRP01130 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.57□□□□□ -1.52
LDLRP01130 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.57□□□□□ -1.52
LDLRP01130 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 RN7SKP279-201ENST00000411383 298 ntBASIC5.57□□□□□ -1.52
LDLRP01130 USP9YP19-201ENST00000412165 485 ntBASIC5.57□□□□□ -1.52
LDLRP01130 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.57□□□□□ -1.52
LDLRP01130 RPS15AP30-201ENST00000420976 390 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AL355433.1-201ENST00000422804 300 ntBASIC5.57□□□□□ -1.52
LDLRP01130 BX119321.1-201ENST00000428912 797 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AC005077.1-201ENST00000449226 375 ntBASIC5.57□□□□□ -1.52
LDLRP01130 SDC4P-201ENST00000453285 601 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AL603882.1-201ENST00000463059 681 ntBASIC5.57□□□□□ -1.52
LDLRP01130 RN7SL799P-201ENST00000475891 298 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.57□□□□□ -1.52
LDLRP01130 RPS23P1-201ENST00000491662 432 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.57□□□□□ -1.52
LDLRP01130 AC108043.1-201ENST00000512696 574 ntBASIC5.57□□□□□ -1.52
LDLRP01130 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.57□□□□□ -1.52
LDLRP01130 OR4A43P-201ENST00000532938 908 ntBASIC5.57□□□□□ -1.52
LDLRP01130 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.57□□□□□ -1.52
LDLRP01130 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.57□□□□□ -1.52
LDLRP01130 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.57□□□□□ -1.52
LDLRP01130 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.57□□□□□ -1.52
LDLRP01130 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.57□□□□□ -1.52
LDLRP01130 MIR6793-201ENST00000612376 63 ntBASIC5.57□□□□□ -1.52
LDLRP01130 AC022106.1-201ENST00000612834 766 ntBASIC5.57□□□□□ -1.52
LDLRP01130 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.57□□□□□ -1.52
LDLRP01130 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 AP001284.1-201ENST00000528393 2118 ntBASIC5.57□□□□□ -1.52
LDLRP01130 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.57□□□□□ -1.52
LDLRP01130 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LDLRP01130 AC106872.5-201ENST00000508856 1416 ntBASIC5.57□□□□□ -1.52
LDLRP01130 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms