Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC71Q8IV32 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 PDZK1P1-202ENST00000425209 1350 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 OR13C1P-202ENST00000641378 2919 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AL391361.1-201ENST00000405580 489 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 GPS2P1-201ENST00000411761 986 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 BMS1P13-201ENST00000417301 885 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC023245.1-201ENST00000468501 517 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AP000926.3-201ENST00000497201 299 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC008629.2-201ENST00000503783 483 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC109481.1-201ENST00000509173 282 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC008676.3-201ENST00000521237 435 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 MTATP6P25-201ENST00000574491 261 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AP001496.3-201ENST00000580230 913 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AL035661.1-201ENST00000620459 1144 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 AC083899.1-201ENST00000454465 3819 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 CR788268.1-201ENST00000603931 1809 ntBASIC5.3□□□□□ -1.56
CCDC71Q8IV32 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC71Q8IV32 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 SNORA70.6-201ENST00000383934 134 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 OR7E101P-201ENST00000400428 513 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 MIR1178-201ENST00000408396 91 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 GNG5P5-201ENST00000420444 220 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC093155.2-201ENST00000420734 937 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 RPL34P3-201ENST00000421454 338 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC009784.1-201ENST00000426484 460 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 BRWD1P3-201ENST00000428816 390 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AL157385.1-201ENST00000446973 268 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AL157777.1-201ENST00000468100 304 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 DEFB109A-201ENST00000482450 265 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 OR4A43P-201ENST00000532938 908 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC091078.2-201ENST00000557145 559 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC010547.6-201ENST00000571789 193 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 MIR3176-201ENST00000582210 90 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AC010615.3-201ENST00000597319 394 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AL589674.2-201ENST00000604304 337 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AP000864.1-201ENST00000609424 650 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 AL162574.1-201ENST00000615702 950 ntBASIC5.29□□□□□ -1.56
CCDC71Q8IV32 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CCDC71Q8IV32 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC71Q8IV32 AC093849.1-201ENST00000563631 2209 ntBASIC5.28□□□□□ -1.56
CCDC71Q8IV32 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71Q8IV32 PROS2P-201ENST00000474651 1951 ntBASIC5.28□□□□□ -1.56
CCDC71Q8IV32 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71Q8IV32 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC71Q8IV32 HMGB1P20-201ENST00000402555 677 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms