Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 CR383658.1-201ENST00000514609 734 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC110760.3-202ENST00000515177 371 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC020937.1-201ENST00000519677 1013 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 IGKV2-4-201ENST00000523070 340 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 SOX5P1-201ENST00000524155 1127 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 C1DP5-201ENST00000525775 383 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 BCAS2P1-201ENST00000528022 632 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL022394.1-201ENST00000606979 292 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 AL356118.1-201ENST00000635272 1078 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 OR5AC4P-202ENST00000642086 985 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 MFSD8-239ENST00000641590 2479 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 MTCO1P28-201ENST00000574177 1528 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 MFSD8-219ENST00000641228 2559 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 RBMY1HP-201ENST00000382759 1389 ntBASIC5.26□□□□□ -1.57
SHFQ7M4L6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SHFQ7M4L6 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SHFQ7M4L6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 GNL2P1-201ENST00000451274 2190 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC090220.1-201ENST00000593078 1699 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 MTCO1P4-201ENST00000520516 1409 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 RNA5SP110-201ENST00000362638 115 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 RNA5SP91-201ENST00000390902 119 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 RNA5SP198-201ENST00000410376 127 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 CBX1P3-201ENST00000413296 527 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC099782.1-201ENST00000425889 474 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 HMGN2P27-201ENST00000427352 270 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC046176.1-201ENST00000435260 1170 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC096775.1-201ENST00000437724 448 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 ARMC4P1-201ENST00000438905 707 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 MED28P3-201ENST00000444288 531 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 FTLP8-201ENST00000446770 267 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AL627224.1-201ENST00000448334 444 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC099670.1-201ENST00000455141 783 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 NPM1P17-201ENST00000479221 602 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC021087.2-201ENST00000504656 1203 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 ZNF519P4-201ENST00000514008 125 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC009852.2-201ENST00000567898 485 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 GARSP1-201ENST00000570895 719 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 OOSP1P2-201ENST00000579644 351 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 SMIM12P1-201ENST00000603004 274 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AL158050.2-201ENST00000605336 568 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC015849.2-201ENST00000605738 409 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC067838.1-201ENST00000606064 577 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC005828.7-201ENST00000607331 556 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC018926.1-201ENST00000616335 435 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AL445528.2-201ENST00000620582 470 ntBASIC5.25□□□□□ -1.57
SHFQ7M4L6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.25□□□□□ -1.57
SHFQ7M4L6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SHFQ7M4L6 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms