Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 AC092681.1-201ENST00000297369 291 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 RN7SKP160-201ENST00000363804 340 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 AL035696.2-201ENST00000407941 709 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 NENFP1-201ENST00000419476 466 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK2P53671 BX510359.3-201ENST00000422168 306 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 NDUFB4P8-201ENST00000435351 367 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK2P53671 RPS23P6-201ENST00000466136 431 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK2P53671 RNU6-615P-201ENST00000516065 106 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 IGLV3-24-201ENST00000517477 197 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 AC021678.3-201ENST00000517893 476 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK2P53671 HSPE1P2-201ENST00000554777 306 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK2P53671 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC234775.3-201ENST00000564612 656 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.62□□□□□ -1.51
LIMK2P53671 MIR4489-201ENST00000578869 62 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 AC010632.3-201ENST00000611377 369 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
LIMK2P53671 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
LIMK2P53671 AC233968.1-201ENST00000611212 1300 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK2P53671 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.62□□□□□ -1.51
LIMK2P53671 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
LIMK2P53671 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 PWAR1-201ENST00000624188 2414 ntBASIC5.62□□□□□ -1.51
LIMK2P53671 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIMK2P53671 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
LIMK2P53671 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.61□□□□□ -1.51
LIMK2P53671 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 GPS2P1-201ENST00000411761 986 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.61□□□□□ -1.51
LIMK2P53671 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.61□□□□□ -1.51
LIMK2P53671 AL596266.1-201ENST00000448132 400 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 EIF3LP3-201ENST00000495197 822 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 RPS26P24-201ENST00000497656 331 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 DUTP7-201ENST00000507982 486 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 AC079097.1-201ENST00000512187 1399 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 SCARNA6.1-201ENST00000516989 238 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 HMGB1P42-201ENST00000532126 553 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 OR5AM1P-201ENST00000532136 1032 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.61□□□□□ -1.51
LIMK2P53671 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 MIR4311-201ENST00000580794 100 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.61□□□□□ -1.51
LIMK2P53671 AP000864.1-201ENST00000609424 650 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 AL353684.1-201ENST00000622677 1120 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 CU639417.4-201ENST00000623928 207 ntBASIC5.61□□□□□ -1.51
LIMK2P53671 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
LIMK2P53671 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.61□□□□□ -1.51
LIMK2P53671 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
LIMK2P53671 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
LIMK2P53671 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
LIMK2P53671 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
LIMK2P53671 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
LIMK2P53671 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LIMK2P53671 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms