Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.5□□□□□ -1.53
RPA3P35244 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.5□□□□□ -1.53
RPA3P35244 MT-RNR2-201ENST00000387347 1559 ntBASIC5.5□□□□□ -1.53
RPA3P35244 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.5□□□□□ -1.53
RPA3P35244 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RPA3P35244 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.49□□□□□ -1.53
RPA3P35244 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPA3P35244 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
RPA3P35244 AC005005.4-201ENST00000623789 16698 ntBASIC5.49□□□□□ -1.53
RPA3P35244 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.49□□□□□ -1.53
RPA3P35244 OR9K1P-201ENST00000326513 941 ntBASIC5.49□□□□□ -1.53
RPA3P35244 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 AC007618.1-201ENST00000366455 732 ntBASIC5.49□□□□□ -1.53
RPA3P35244 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
RPA3P35244 COX5BP7-201ENST00000414780 274 ntBASIC5.49□□□□□ -1.53
RPA3P35244 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.49□□□□□ -1.53
RPA3P35244 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.49□□□□□ -1.53
RPA3P35244 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RPA3P35244 RPS29P14-201ENST00000431518 171 ntBASIC5.49□□□□□ -1.53
RPA3P35244 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.49□□□□□ -1.53
RPA3P35244 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.49□□□□□ -1.53
RPA3P35244 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.49□□□□□ -1.53
RPA3P35244 RPL31P15-201ENST00000449770 338 ntBASIC5.49□□□□□ -1.53
RPA3P35244 PRPF38AP1-201ENST00000451976 933 ntBASIC5.49□□□□□ -1.53
RPA3P35244 RPL12P24-201ENST00000474907 486 ntBASIC5.49□□□□□ -1.53
RPA3P35244 RN7SL583P-201ENST00000475692 287 ntBASIC5.49□□□□□ -1.53
RPA3P35244 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPA3P35244 MYL12BP2-201ENST00000503948 512 ntBASIC5.49□□□□□ -1.53
RPA3P35244 IMPA1P1-201ENST00000510718 842 ntBASIC5.49□□□□□ -1.53
RPA3P35244 AC112191.2-201ENST00000522428 333 ntBASIC5.49□□□□□ -1.53
RPA3P35244 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.49□□□□□ -1.53
RPA3P35244 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 AC073869.8-201ENST00000641806 335 ntBASIC5.49□□□□□ -1.53
RPA3P35244 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
RPA3P35244 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
RPA3P35244 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
RPA3P35244 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 AC130360.2-201ENST00000533477 1556 ntBASIC5.48□□□□□ -1.53
RPA3P35244 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.48□□□□□ -1.53
RPA3P35244 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
RPA3P35244 RPL12P9-201ENST00000412942 488 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.48□□□□□ -1.53
RPA3P35244 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.48□□□□□ -1.53
RPA3P35244 AC017019.1-201ENST00000426129 261 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.48□□□□□ -1.53
RPA3P35244 RPL36AP39-201ENST00000445859 318 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AC144530.1-201ENST00000452862 555 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AL358876.1-201ENST00000453364 1075 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AC245028.2-201ENST00000458673 253 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AP000797.2-201ENST00000475768 606 ntBASIC5.48□□□□□ -1.53
RPA3P35244 RPS3AP15-201ENST00000483874 781 ntBASIC5.48□□□□□ -1.53
RPA3P35244 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
RPA3P35244 SNORA43.3-201ENST00000517240 103 ntBASIC5.48□□□□□ -1.53
RPA3P35244 MRPS16P1-201ENST00000523462 412 ntBASIC5.48□□□□□ -1.53
RPA3P35244 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.48□□□□□ -1.53
RPA3P35244 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.48□□□□□ -1.53
RPA3P35244 LSM3P2-201ENST00000551246 273 ntBASIC5.48□□□□□ -1.53
RPA3P35244 OR11H3P-201ENST00000554547 982 ntBASIC5.48□□□□□ -1.53
RPA3P35244 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.48□□□□□ -1.53
RPA3P35244 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.48□□□□□ -1.53
RPA3P35244 PRPF19P1-201ENST00000584766 898 ntBASIC5.48□□□□□ -1.53
RPA3P35244 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.48□□□□□ -1.53
RPA3P35244 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.48□□□□□ -1.53
RPA3P35244 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.48□□□□□ -1.53
RPA3P35244 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.48□□□□□ -1.53
RPA3P35244 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.48□□□□□ -1.53
RPA3P35244 AC135068.5-201ENST00000624197 983 ntBASIC5.48□□□□□ -1.53
RPA3P35244 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.48□□□□□ -1.53
RPA3P35244 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.48□□□□□ -1.53
RPA3P35244 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 OR13C1P-202ENST00000641378 2919 ntBASIC5.48□□□□□ -1.53
RPA3P35244 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
RPA3P35244 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.48□□□□□ -1.53
RPA3P35244 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.47□□□□□ -1.53
RPA3P35244 MRE11P1-201ENST00000464884 2127 ntBASIC5.47□□□□□ -1.53
RPA3P35244 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 TRIM51GP-201ENST00000534741 1350 ntBASIC5.47□□□□□ -1.53
RPA3P35244 TCP11X1-202ENST00000622971 1372 ntBASIC5.47□□□□□ -1.53
RPA3P35244 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
RPA3P35244 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RPA3P35244 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms