Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.43□□□□□ -1.54
SHMT2P34897 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.43□□□□□ -1.54
SHMT2P34897 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHMT2P34897 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHMT2P34897 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
SHMT2P34897 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHMT2P34897 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHMT2P34897 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SHMT2P34897 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.42□□□□□ -1.54
SHMT2P34897 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHMT2P34897 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
SHMT2P34897 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.42□□□□□ -1.54
SHMT2P34897 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.42□□□□□ -1.54
SHMT2P34897 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHMT2P34897 AL121886.1-201ENST00000358609 435 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.42□□□□□ -1.54
SHMT2P34897 AL009179.1-201ENST00000406085 265 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 AL513325.1-201ENST00000417716 1034 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 REREP1Y-201ENST00000422655 198 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.42□□□□□ -1.54
SHMT2P34897 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.42□□□□□ -1.54
SHMT2P34897 REREP2Y-201ENST00000439103 200 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 PPIAP20-201ENST00000449839 135 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.42□□□□□ -1.54
SHMT2P34897 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.42□□□□□ -1.54
SHMT2P34897 NPM1P21-201ENST00000513394 762 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 OR4A43P-201ENST00000532938 908 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 AC015720.2-201ENST00000567709 334 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 SNORD95-201ENST00000579879 68 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.42□□□□□ -1.54
SHMT2P34897 AL589674.2-201ENST00000604304 337 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 AC016252.1-201ENST00000609721 474 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 AC025574.2-201ENST00000615621 514 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.42□□□□□ -1.54
SHMT2P34897 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.42□□□□□ -1.54
SHMT2P34897 AL049767.1-202ENST00000637826 242 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHMT2P34897 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SHMT2P34897 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SHMT2P34897 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
SHMT2P34897 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.42□□□□□ -1.54
SHMT2P34897 MT-RNR2-201ENST00000387347 1559 ntBASIC5.42□□□□□ -1.54
SHMT2P34897 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 OR4F13P-202ENST00000560066 2054 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.41□□□□□ -1.54
SHMT2P34897 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 AL138820.1-201ENST00000617901 5305 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 AC005042.1-201ENST00000393397 800 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 PEX12P1-201ENST00000400284 1048 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 AL391422.1-201ENST00000402155 436 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 AC096921.1-201ENST00000411661 375 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.41□□□□□ -1.54
SHMT2P34897 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 AL121776.1-201ENST00000429337 372 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.41□□□□□ -1.54
SHMT2P34897 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.41□□□□□ -1.54
SHMT2P34897 AL596266.1-201ENST00000448132 400 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.41□□□□□ -1.54
SHMT2P34897 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 GAPDHP62-201ENST00000515313 990 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 AL359219.2-201ENST00000555184 348 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.41□□□□□ -1.54
SHMT2P34897 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SHMT2P34897 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 FAM72A-208ENST00000607379 1139 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 MIR6768-201ENST00000610734 72 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.41□□□□□ -1.54
SHMT2P34897 AC010809.3-201ENST00000621310 641 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.41□□□□□ -1.54
SHMT2P34897 AC099654.3-201ENST00000447087 1546 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHMT2P34897 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 AC002525.1-201ENST00000624392 1622 ntBASIC5.41□□□□□ -1.54
SHMT2P34897 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.41□□□□□ -1.54
SHMT2P34897 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
SHMT2P34897 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHMT2P34897 HSPD1P7-201ENST00000447985 1686 ntBASIC5.4□□□□□ -1.54
SHMT2P34897 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.4□□□□□ -1.54
SHMT2P34897 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHMT2P34897 AL121839.2-201ENST00000565058 6943 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms