Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC006362.1-201ENST00000567392 174 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AP002906.1-201ENST00000603405 233 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AL590229.1-201ENST00000603497 542 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC005377.1-201ENST00000605126 456 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AL139286.2-201ENST00000606838 396 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC007349.4-201ENST00000608114 532 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC091768.1-201ENST00000609258 930 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC092266.1-201ENST00000610958 165 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AL354976.1-201ENST00000613843 387 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC010333.3-201ENST00000615100 402 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC024595.1-201ENST00000623088 387 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 ANKRD36BP1-202ENST00000604892 1417 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AP000641.1-201ENST00000531988 1639 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC093278.2-201ENST00000564956 2485 ntBASIC8.68□□□□□ -1.02
CSB-PGBD3P0DP91 AC027575.3-201ENST00000583058 2747 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 RNY3P14-201ENST00000384309 102 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 RNU4-74P-201ENST00000411280 161 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC244452.1-201ENST00000413798 141 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 PTGES3P1-201ENST00000439531 483 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 SEPT14P24-201ENST00000447236 180 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AP000542.1-201ENST00000448473 371 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC011037.1-201ENST00000483964 558 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SL101P-201ENST00000496350 279 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC008837.1-201ENST00000511513 412 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC079905.1-201ENST00000549280 475 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 SETP1-201ENST00000556014 845 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC073046.2-201ENST00000604756 527 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC092681.3-201ENST00000609463 678 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 TUSC7.1-201ENST00000610969 165 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC024941.1-201ENST00000612250 334 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC091932.2-201ENST00000623014 291 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC011592.1-201ENST00000624647 3634 ntBASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
CSB-PGBD3P0DP91 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC110716.2-201ENST00000563865 3945 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 HSPD1P9-201ENST00000420325 1636 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 AC023490.2-201ENST00000359859 470 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 Y_RNA.3-201ENST00000362331 103 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-1215P-201ENST00000384441 102 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF603P-201ENST00000405613 487 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SKP281-201ENST00000410472 352 ntBASIC8.66□□□□□ -1.02
CSB-PGBD3P0DP91 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms