Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.73□□□□□ -1.33
HLA-DOAP06340 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
HLA-DOAP06340 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
HLA-DOAP06340 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 MFSD8-239ENST00000641590 2479 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC005725.1-201ENST00000577346 2607 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AL589993.1-201ENST00000407450 2524 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 ZNF840P-201ENST00000504759 1996 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 RNU6-386P-201ENST00000362650 107 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 RNU4-2-201ENST00000365668 141 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AP000534.2-201ENST00000412729 568 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 SSR1P2-201ENST00000415208 787 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC006335.2-201ENST00000437993 330 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AL163193.1-201ENST00000444895 788 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 RN7SL51P-201ENST00000468230 285 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 OR2AO1P-201ENST00000476497 403 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 EIF1P7-201ENST00000487533 337 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 DUTP1-201ENST00000493631 470 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC008638.1-201ENST00000506035 866 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC078899.1-201ENST00000521432 1185 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AL158050.2-201ENST00000605336 568 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC034236.3-201ENST00000605999 461 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC010245.2-201ENST00000606908 1167 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AF129408.1-201ENST00000608767 431 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 SDR42E1P1-201ENST00000611327 477 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AL356863.1-201ENST00000623378 1080 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AP006248.3-201ENST00000623580 594 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC097372.4-201ENST00000625025 466 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 CU459211.1-201ENST00000635667 749 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.72□□□□□ -1.33
HLA-DOAP06340 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC022164.1-201ENST00000568767 2673 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 AC061975.7-201ENST00000592016 2692 ntBASIC6.72□□□□□ -1.33
HLA-DOAP06340 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
HLA-DOAP06340 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-DOAP06340 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-DOAP06340 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
HLA-DOAP06340 AC016251.2-201ENST00000623393 3089 ntBASIC6.71□□□□□ -1.33
HLA-DOAP06340 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 MARK2P4-201ENST00000503381 2380 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 RN7SKP28-201ENST00000364770 305 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AL117351.1-201ENST00000438864 766 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 RANP1-206ENST00000455094 651 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 OR10D4P-201ENST00000525892 951 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC012414.2-201ENST00000559474 187 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC104072.1-201ENST00000568817 668 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 OR7E18P-201ENST00000592589 702 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 IMMP1LP3-201ENST00000604197 224 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC005840.5-201ENST00000619166 599 ntBASIC6.71□□□□□ -1.34
HLA-DOAP06340 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.71□□□□□ -1.34
HLA-DOAP06340 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms