Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Mir6349-201ENSMUST00000184059 97 ntBASIC17.16■□□□□ 0.34
Speer3W4VSP1 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.16■□□□□ 0.34
Speer3W4VSP1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.16■□□□□ 0.34
Speer3W4VSP1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.15■□□□□ 0.34
Speer3W4VSP1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm15375-201ENSMUST00000119510 849 ntBASIC17.15■□□□□ 0.34
Speer3W4VSP1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm29791-202ENSMUST00000207888 369 ntBASIC17.15■□□□□ 0.34
Speer3W4VSP1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.15■□□□□ 0.34
Speer3W4VSP1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Speer3W4VSP1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Speer3W4VSP1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.14■□□□□ 0.33
Speer3W4VSP1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.14■□□□□ 0.33
Speer3W4VSP1 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Speer3W4VSP1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.13■□□□□ 0.33
Speer3W4VSP1 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.13■□□□□ 0.33
Speer3W4VSP1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Speer3W4VSP1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Speer3W4VSP1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms