Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Nr1h3Q9Z0Y9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Nr1h3Q9Z0Y9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Nr1h3Q9Z0Y9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Nr1h3Q9Z0Y9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Nr1h3Q9Z0Y9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Nr1h3Q9Z0Y9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nr1h3Q9Z0Y9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nr1h3Q9Z0Y9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nr1h3Q9Z0Y9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nr1h3Q9Z0Y9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms