Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scn8aQ9WTU3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Scn8aQ9WTU3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Scn8aQ9WTU3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Scn8aQ9WTU3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scn8aQ9WTU3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gm18669-201ENSMUST00000216049 778 ntBASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scn8aQ9WTU3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms