Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf40aQ9R1C7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Gm27463-201ENSMUST00000183569 57 ntBASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf40aQ9R1C7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf40aQ9R1C7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf40aQ9R1C7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Gm30025-201ENSMUST00000218555 728 ntBASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Il3ra-202ENSMUST00000223589 738 ntBASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Prpf40aQ9R1C7 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.52■□□□□ 0.55
Prpf40aQ9R1C7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40aQ9R1C7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
Prpf40aQ9R1C7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf40aQ9R1C7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Mir6982-201ENSMUST00000184354 68 ntBASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Prpf40aQ9R1C7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Prpf40aQ9R1C7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Prpf40aQ9R1C7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms