Protein–RNA interactions for Protein: Q9R078

Prkab1, 5'-AMP-activated protein kinase subunit beta-1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prkab1Q9R078 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prkab1Q9R078 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.26■□□□□ 0.67
Prkab1Q9R078 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prkab1Q9R078 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prkab1Q9R078 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prkab1Q9R078 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prkab1Q9R078 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Prkab1Q9R078 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.24■□□□□ 0.67
Prkab1Q9R078 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prkab1Q9R078 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.24■□□□□ 0.67
Prkab1Q9R078 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Prkab1Q9R078 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prkab1Q9R078 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.23■□□□□ 0.67
Prkab1Q9R078 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.23■□□□□ 0.67
Prkab1Q9R078 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Gm12895-201ENSMUST00000122214 226 ntBASIC19.22■□□□□ 0.67
Prkab1Q9R078 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prkab1Q9R078 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Birc2-201ENSMUST00000054878 378 ntBASIC19.21■□□□□ 0.67
Prkab1Q9R078 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.21■□□□□ 0.67
Prkab1Q9R078 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prkab1Q9R078 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prkab1Q9R078 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms