Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.61■□□□□ 0.73
Trim44Q9QXA7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim44Q9QXA7 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.6■□□□□ 0.73
Trim44Q9QXA7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.59■□□□□ 0.73
Trim44Q9QXA7 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim44Q9QXA7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim44Q9QXA7 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.58■□□□□ 0.72
Trim44Q9QXA7 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Gm43598-201ENSMUST00000202482 2479 ntBASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim44Q9QXA7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim44Q9QXA7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms