Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Msh5Q9QUM7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Msh5Q9QUM7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Msh5Q9QUM7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Msh5Q9QUM7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Gm28877-201ENSMUST00000191349 604 ntBASIC17.2■□□□□ 0.34
Msh5Q9QUM7 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Msh5Q9QUM7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Gm13216-201ENSMUST00000117145 591 ntBASIC17.19■□□□□ 0.34
Msh5Q9QUM7 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Msh5Q9QUM7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Gm43974-201ENSMUST00000205080 684 ntBASIC17.18■□□□□ 0.34
Msh5Q9QUM7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Msh5Q9QUM7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Msh5Q9QUM7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms