Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sec61a2Q9JLR1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Mir5122-201ENSMUST00000175004 89 ntBASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Sec61a2Q9JLR1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Sec61a2Q9JLR1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Gm37055-201ENSMUST00000191866 133 ntBASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Sec61a2Q9JLR1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.16■□□□□ 0.02
Sec61a2Q9JLR1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms