Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gm4968-201ENSMUST00000071458 858 ntBASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh2d4aQ9D7V1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Gm12933-201ENSMUST00000120203 872 ntBASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Gm2559-201ENSMUST00000201323 363 ntBASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.36■□□□□ 0.21
Sh2d4aQ9D7V1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Gm15375-201ENSMUST00000119510 849 ntBASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh2d4aQ9D7V1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Dio3-201ENSMUST00000097228 1449 ntBASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Sh2d4aQ9D7V1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.33■□□□□ 0.21
Sh2d4aQ9D7V1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.33■□□□□ 0.21
Sh2d4aQ9D7V1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Sh2d4aQ9D7V1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh2d4aQ9D7V1 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Sh2d4aQ9D7V1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Sh2d4aQ9D7V1 Gm6576-201ENSMUST00000169678 883 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms