Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Haglr-201ENSMUST00000100000 2085 ntBASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Mir1199-201ENSMUST00000117015 119 ntBASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rpusd4Q9CWX4 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rpusd4Q9CWX4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.27□□□□□ -0.12
Rpusd4Q9CWX4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Gm10418-201ENSMUST00000100943 576 ntBASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Gm37292-201ENSMUST00000192062 758 ntBASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Gm43183-201ENSMUST00000200632 547 ntBASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rpusd4Q9CWX4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Gm6576-201ENSMUST00000169678 883 ntBASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Gm42545-201ENSMUST00000202755 922 ntBASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rpusd4Q9CWX4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rpusd4Q9CWX4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms