Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf135Q9CWS1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf135Q9CWS1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf135Q9CWS1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Gm5417-201ENSMUST00000079706 384 ntBASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf135Q9CWS1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf135Q9CWS1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf135Q9CWS1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf135Q9CWS1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rnf135Q9CWS1 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf135Q9CWS1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf135Q9CWS1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms