Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rer1Q9CQU3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Rer1Q9CQU3 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Haglr-201ENSMUST00000100000 2085 ntBASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rer1Q9CQU3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rer1Q9CQU3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Gm13216-201ENSMUST00000117145 591 ntBASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rer1Q9CQU3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Rer1Q9CQU3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rer1Q9CQU3 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Rer1Q9CQU3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Gm10698-201ENSMUST00000182663 604 ntBASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Gm37025-201ENSMUST00000195159 829 ntBASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rer1Q9CQU3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms