Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Smim3Q99PE5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smim3Q99PE5 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.45□□□□□ -0.1
Smim3Q99PE5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Gm43060-201ENSMUST00000200621 289 ntBASIC14.45□□□□□ -0.1
Smim3Q99PE5 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smim3Q99PE5 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.44□□□□□ -0.1
Smim3Q99PE5 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smim3Q99PE5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smim3Q99PE5 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smim3Q99PE5 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Smim3Q99PE5 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms