Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.14■□□□□ 0.01
Raf1Q99N57 Wnt10b-205ENSMUST00000226846 1204 ntBASIC15.14■□□□□ 0.01
Raf1Q99N57 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Raf1Q99N57 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.14■□□□□ 0.01
Raf1Q99N57 Flg-201ENSMUST00000050758 1488 ntBASIC15.14■□□□□ 0.01
Raf1Q99N57 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Raf1Q99N57 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.13■□□□□ 0.01
Raf1Q99N57 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Mir2861-201ENSMUST00000175539 82 ntBASIC15.13■□□□□ 0.01
Raf1Q99N57 Gm37055-201ENSMUST00000191866 133 ntBASIC15.13■□□□□ 0.01
Raf1Q99N57 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Raf1Q99N57 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Raf1Q99N57 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.13■□□□□ 0.01
Raf1Q99N57 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Gm11249-201ENSMUST00000117071 859 ntBASIC15.12■□□□□ 0.01
Raf1Q99N57 Gm11643-201ENSMUST00000119578 864 ntBASIC15.12■□□□□ 0.01
Raf1Q99N57 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.12■□□□□ 0.01
Raf1Q99N57 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.12■□□□□ 0.01
Raf1Q99N57 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Raf1Q99N57 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.11■□□□□ 0.01
Raf1Q99N57 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Raf1Q99N57 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.11■□□□□ 0.01
Raf1Q99N57 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Raf1Q99N57 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.11■□□□□ 0.01
Raf1Q99N57 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.11■□□□□ 0.01
Raf1Q99N57 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Raf1Q99N57 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Raf1Q99N57 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Raf1Q99N57 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Raf1Q99N57 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Raf1Q99N57 Gm10698-201ENSMUST00000182663 604 ntBASIC15.1■□□□□ 0.01
Raf1Q99N57 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Raf1Q99N57 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms