Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm9731-201ENSMUST00000209480 747 ntBASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Col25a1Q99MQ5 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Gm14701-201ENSMUST00000117156 348 ntBASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Col25a1Q99MQ5 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Mir6956-201ENSMUST00000183598 62 ntBASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Chchd1-203ENSMUST00000224633 557 ntBASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col25a1Q99MQ5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col25a1Q99MQ5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Col25a1Q99MQ5 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Gm14140-201ENSMUST00000119999 995 ntBASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col25a1Q99MQ5 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms