Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Pcdha2Q91Y17 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Pcdha2Q91Y17 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Pcdha2Q91Y17 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha2Q91Y17 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha2Q91Y17 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Gm9013-201ENSMUST00000132939 882 ntBASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Gm18421-201ENSMUST00000204122 625 ntBASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Gm5587-201ENSMUST00000206270 674 ntBASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha2Q91Y17 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms