Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhac1Q91Y10 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhac1Q91Y10 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Gm42545-201ENSMUST00000202755 922 ntBASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhac1Q91Y10 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhac1Q91Y10 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Gm10812-201ENSMUST00000099864 546 ntBASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhac1Q91Y10 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Gm37292-201ENSMUST00000192062 758 ntBASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhac1Q91Y10 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhac1Q91Y10 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhac1Q91Y10 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhac1Q91Y10 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhac1Q91Y10 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhac1Q91Y10 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.74■□□□□ 0.11
Pcdhac1Q91Y10 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms