Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhga11Q91XY8 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Gm17661-201ENSMUST00000170317 270 ntBASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdhga11Q91XY8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Mir6982-201ENSMUST00000184354 68 ntBASIC16.27■□□□□ 0.2
Pcdhga11Q91XY8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga11Q91XY8 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga11Q91XY8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhga11Q91XY8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga11Q91XY8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhga11Q91XY8 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhga11Q91XY8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Pcdhga11Q91XY8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhga11Q91XY8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga11Q91XY8 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhga11Q91XY8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhga11Q91XY8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms