Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Gm23634-201ENSMUST00000175071 91 ntBASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retreg1dQ8VE91 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Gm18101-201ENSMUST00000215769 548 ntBASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retreg1dQ8VE91 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Gm7370-201ENSMUST00000219471 767 ntBASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retreg1dQ8VE91 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Il3ra-202ENSMUST00000223589 738 ntBASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retreg1dQ8VE91 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg1dQ8VE91 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg1dQ8VE91 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg1dQ8VE91 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg1dQ8VE91 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retreg1dQ8VE91 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Retreg1dQ8VE91 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms