Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Ndc1Q8VCB1 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Gm25016-201ENSMUST00000158399 131 ntBASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Ndc1Q8VCB1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Ndc1Q8VCB1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Ndc1Q8VCB1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gm18958-201ENSMUST00000174258 762 ntBASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ndc1Q8VCB1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms