Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Rnf8Q8VC56 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf8Q8VC56 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.24■□□□□ 0.19
Rnf8Q8VC56 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Dancr-204ENSMUST00000132389 2347 ntBASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf8Q8VC56 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Gm12382-201ENSMUST00000122005 922 ntBASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf8Q8VC56 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Mir8112-201ENSMUST00000184382 131 ntBASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rnf8Q8VC56 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf8Q8VC56 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf8Q8VC56 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rnf8Q8VC56 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf8Q8VC56 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf8Q8VC56 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rnf8Q8VC56 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms