Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Gm7791-201ENSMUST00000219066 539 ntBASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim29Q8R2Q0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim29Q8R2Q0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
Trim29Q8R2Q0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim29Q8R2Q0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim29Q8R2Q0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim29Q8R2Q0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Gm10252-201ENSMUST00000209541 832 ntBASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim29Q8R2Q0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim29Q8R2Q0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Gm5417-201ENSMUST00000079706 384 ntBASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim29Q8R2Q0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim29Q8R2Q0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms