Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Paf1Q8K2T8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Paf1Q8K2T8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Paf1Q8K2T8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Paf1Q8K2T8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Paf1Q8K2T8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.73■□□□□ 0.75
Paf1Q8K2T8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.73■□□□□ 0.75
Paf1Q8K2T8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Mir5130-201ENSMUST00000175160 84 ntBASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Paf1Q8K2T8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Paf1Q8K2T8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Gm9987-201ENSMUST00000069768 567 ntBASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Paf1Q8K2T8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Paf1Q8K2T8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms